Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014974.1 Corchorus capsularis cultivar CVL-1 contig14995, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20802

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2899--3113
108
2.0
107
92
0
358
28
10
15
46
1.78
8565--8732
83
2.0
83
98
0
327
17
29
14
38
1.90
8937--8993
29
2.0
28
93
6
98
21
19
15
43
1.87
9688--9745
29
2.0
29
93
0
98
41
17
18
22
1.90
11174--11272
31
3.2
31
84
2
110
18
20
28
33
1.96
13713--13751
21
1.9
20
84
5
51
46
15
10
28
1.78
14196--14235
17
2.4
17
82
0
53
40
25
7
27
1.82
15057--15082
13
2.0
13
100
0
52
46
7
7
38
1.61
17099--17158
29
2.0
30
93
3
104
53
10
6
30
1.60
20569--20729
60
2.7
60
95
1
279
36
19
19
24
1.95
20565--20760
31
6.5
31
72
13
158
35
19
19
25
1.95

Tables:   1

The End!