Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014977.1 Corchorus capsularis cultivar CVL-1 contig14998, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11085

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--60
16
3.4
16
76
5
63
47
0
0
52
1.00
6--53
25
1.9
25
83
8
62
50
0
0
50
1.00
5--96
31
3.1
30
81
12
109
53
0
0
46
1.00
29--107
36
2.1
36
83
11
95
58
1
1
39
1.14
93--158
11
6.0
11
77
5
53
56
18
9
16
1.66
797--825
7
4.1
7
100
0
58
0
13
13
72
1.13
1104--1137
17
1.9
18
94
5
61
79
14
5
0
0.91
2642--2887
78
3.1
77
84
10
323
49
2
11
37
1.51
3299--3345
3
15.7
3
100
0
94
34
0
0
65
0.93

Tables:   1

The End!