Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014983.1 Corchorus capsularis cultivar CVL-1 contig15004, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20648

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1061--1140
2
39.5
2
82
2
97
42
8
0
48
1.34
1724--1817
47
2.0
47
95
0
170
48
9
9
31
1.68
3963--4237
109
2.5
109
93
4
455
48
1
11
38
1.50
4329--4365
2
18.0
2
88
5
56
48
0
5
45
1.25
5588--5628
21
1.9
21
85
14
57
31
19
7
41
1.79
6106--6133
2
14.0
2
100
0
56
50
0
0
50
1.00
8164--8198
2
17.5
2
93
0
61
48
0
2
48
1.16
14812--14963
78
1.9
78
85
2
207
32
19
25
23
1.97
16308--16338
15
2.1
15
100
0
62
61
12
12
12
1.58
18670--18705
7
5.1
7
100
0
72
13
0
0
86
0.58
20519--20555
19
1.9
19
88
0
56
78
0
0
21
0.75

Tables:   1

The End!