Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014993.1 Corchorus capsularis cultivar CVL-1 contig15014, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48691

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
930--973
11
4.0
11
85
8
54
54
2
0
43
1.12
10148--10200
26
2.0
26
96
0
97
41
5
15
37
1.70
10187--10220
2
17.0
2
93
0
59
50
2
0
47
1.16
16402--16426
2
12.5
2
100
0
50
52
0
0
48
1.00
37662--37725
30
2.2
29
82
2
74
48
4
35
10
1.59
43392--43464
38
1.9
38
97
0
137
36
8
15
39
1.77
43334--43522
93
2.0
94
90
3
299
43
8
13
34
1.75
48652--48691
2
20.0
2
100
0
80
50
0
0
50
1.00

Tables:   1

The End!