Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014994.1 Corchorus capsularis cultivar CVL-1 contig15015, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17938

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1529--1616
31
2.8
31
89
1
140
37
31
12
18
1.88
1640--1725
45
1.9
45
100
0
172
31
26
16
25
1.96
14220--14264
23
2.0
23
100
0
90
33
8
22
35
1.85
17280--17329
25
2.0
25
96
3
93
36
28
10
26
1.88
17424--17466
21
2.0
22
86
4
61
18
37
9
34
1.83

Tables:   1

The End!