Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014999.1 Corchorus capsularis cultivar CVL-1 contig15020, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23045

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--49
2
21.5
2
100
0
86
48
0
0
51
1.00
1742--1966
115
2.0
114
89
0
342
40
11
16
31
1.84
16223--16251
2
14.5
2
100
0
58
48
0
0
51
1.00
18983--19104
59
2.1
59
98
0
235
24
13
11
50
1.75
18983--19072
29
3.1
29
69
15
94
24
12
11
52
1.71
19001--19111
29
3.8
29
76
9
127
24
16
11
47
1.79
20422--20564
71
2.0
71
100
0
286
24
11
29
34
1.90
22485--22530
19
2.4
20
85
10
69
32
4
17
45
1.68

Tables:   1

The End!