Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015003.1 Corchorus capsularis cultivar CVL-1 contig15024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65140

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
418--457
18
2.4
17
88
12
57
47
20
0
32
1.50
8614--8655
12
3.5
12
93
0
66
28
2
40
28
1.69
24362--24395
9
3.8
9
92
0
50
0
23
0
76
0.79
36626--36700
34
2.2
34
90
2
116
18
28
4
49
1.65
36735--36870
33
4.1
33
87
0
191
34
19
19
27
1.95
36869--36930
30
2.1
29
90
3
97
29
19
16
35
1.93
38150--38177
2
14.0
2
100
0
56
50
0
0
50
1.00
40530--40657
64
2.0
64
100
0
256
28
12
23
35
1.91

Tables:   1

The End!