Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015006.1 Corchorus capsularis cultivar CVL-1 contig15027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38948

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
568--594
14
1.9
14
100
0
54
14
37
0
48
1.45
4011--4036
2
13.0
2
100
0
52
50
0
0
50
1.00
14191--14234
22
2.0
22
86
0
61
43
11
18
27
1.84
22393--22467
34
2.2
34
97
0
141
20
8
10
61
1.53
22055--22631
284
2.0
286
89
5
885
17
9
19
53
1.70
25118--25153
2
18.5
2
94
5
65
52
0
0
47
1.00
30575--30604
2
15.5
2
93
6
53
46
0
0
53
1.00
32531--32607
29
2.6
29
87
2
109
16
28
16
37
1.91
32684--32754
29
2.4
30
85
2
99
36
14
29
19
1.91
33281--34041
383
2.0
372
88
3
1137
39
9
10
40
1.72
37366--38448
332
3.3
330
77
8
919
35
13
13
37
1.85

Tables:   1

The End!