Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015008.1 Corchorus capsularis cultivar CVL-1 contig15029, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21406

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
571--613
22
2.0
22
86
4
61
51
32
0
16
1.45
1024--1153
66
2.0
66
95
0
233
32
16
15
35
1.91
3313--3365
22
2.4
22
82
14
65
30
16
11
41
1.84
3486--3637
22
6.9
22
72
10
103
30
17
9
42
1.81
3357--3600
65
3.7
64
77
6
204
33
16
9
40
1.82
3572--3683
51
2.3
47
85
13
149
30
15
8
45
1.76
3599--3694
51
1.9
49
93
4
165
29
16
8
45
1.76
3717--3768
22
2.4
22
86
0
68
30
11
7
50
1.67
4863--5886
436
2.3
436
81
6
1167
31
13
12
42
1.82
9007--9041
19
1.9
17
88
11
52
57
5
14
22
1.59
9666--9957
146
2.0
147
96
0
541
38
13
14
33
1.84
11320--11358
7
5.6
7
93
0
69
41
12
30
15
1.85
12092--12131
13
3.2
13
85
7
64
40
12
12
35
1.81
12092--12127
12
2.9
12
91
4
54
41
11
11
36
1.76
13654--13718
30
2.2
28
81
7
76
23
4
7
64
1.38

Tables:   1

The End!