Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015015.1 Corchorus capsularis cultivar CVL-1 contig15036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14115

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62--92
2
15.5
2
100
0
62
48
0
0
51
1.00
3633--3662
3
10.0
3
100
0
60
33
0
0
66
0.92
6431--6464
12
2.7
13
90
4
52
52
0
26
20
1.46
6799--6895
22
4.6
22
65
23
73
37
12
9
41
1.75
6920--7496
22
26.6
22
68
13
186
35
15
9
38
1.81
6799--6950
62
2.5
62
95
0
268
34
13
8
42
1.75
7185--7286
46
2.3
44
83
6
116
39
13
8
38
1.76
7601--7706
22
4.8
22
75
6
90
32
16
10
40
1.83
8414--8510
38
2.6
36
74
7
104
57
10
17
14
1.64
12292--12353
31
2.0
31
87
6
90
32
19
1
46
1.59
12866--13028
22
7.3
21
75
8
110
34
7
19
38
1.81
13218--13315
21
4.4
23
78
14
73
44
9
12
33
1.73
13277--13469
44
4.4
44
76
6
187
44
8
11
35
1.72
13199--13445
22
11.3
22
71
9
157
42
9
13
34
1.77
13589--13686
43
2.3
43
82
5
117
42
9
14
33
1.77
13691--13814
45
2.8
43
78
10
133
41
8
12
37
1.72
13691--13828
45
3.1
45
82
5
120
40
7
13
37
1.74
13589--13995
44
9.3
44
71
8
190
37
9
15
36
1.81
13589--14083
22
22.7
22
68
13
155
39
9
15
35
1.80

Tables:   1

The End!