Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015018.1 Corchorus capsularis cultivar CVL-1 contig15039, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27077

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4008--4105
32
3.1
32
86
0
124
37
32
10
19
1.85
4051--4107
16
3.6
16
68
0
51
35
35
8
21
1.84
7009--7160
74
2.1
74
97
0
286
27
15
15
41
1.87
12189--12226
9
4.2
9
80
12
51
0
15
0
84
0.63
12197--12226
10
3.0
10
95
0
51
0
13
0
86
0.57
13259--13318
29
2.1
29
90
0
93
30
13
21
35
1.92
13258--13325
29
2.5
26
80
15
84
29
11
23
35
1.90
15749--15778
2
15.0
2
100
0
60
50
0
0
50
1.00
22415--22445
8
3.8
8
95
4
53
35
0
12
51
1.40

Tables:   1

The End!