Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015019.1 Corchorus capsularis cultivar CVL-1 contig15040, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54446

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17389--17439
21
2.5
20
84
9
68
78
1
5
13
1.02
25538--25615
18
4.3
18
88
0
120
42
8
32
16
1.79
31325--31355
2
15.5
2
100
0
62
51
0
0
48
1.00
33786--33814
2
14.5
2
100
0
58
48
0
0
51
1.00
48243--48302
30
2.0
30
100
0
120
46
0
16
36
1.47
48813--49052
23
10.7
23
79
6
215
29
38
17
15
1.90
48816--49052
46
5.3
46
79
9
256
28
38
17
15
1.90
48778--48990
108
2.0
108
92
0
354
30
36
15
16
1.91
49092--49187
26
3.7
26
80
8
131
28
40
15
15
1.88
50894--51065
90
1.9
90
91
0
281
25
33
27
13
1.93
51313--51619
58
5.3
58
88
0
436
44
13
25
16
1.85
51940--52399
44
10.7
44
91
4
728
44
25
15
14
1.84
54192--54331
38
3.7
37
89
1
208
29
28
23
18
1.98

Tables:   1

The End!