Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015024.1 Corchorus capsularis cultivar CVL-1 contig15045, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19230

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
212--381
81
2.1
79
82
8
211
54
4
8
32
1.50
233--443
71
2.9
68
75
19
174
54
3
10
30
1.53
4837--4934
49
2.0
49
97
0
187
51
3
24
21
1.62
10539--10786
128
1.9
129
85
8
344
31
11
16
40
1.84
11586--11648
31
2.0
31
90
0
99
41
22
15
20
1.90
13725--13801
29
2.6
30
83
4
93
20
15
15
48
1.81
13982--14057
29
2.5
29
78
6
71
44
15
17
22
1.86
16648--16724
29
2.6
31
88
10
108
42
11
15
29
1.82
16778--16964
87
2.1
87
81
5
227
25
17
17
40
1.91

Tables:   1

The End!