Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015025.1 Corchorus capsularis cultivar CVL-1 contig15046, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15486

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
594--628
16
2.2
16
94
0
61
45
14
25
14
1.82
6967--6993
3
9.0
3
100
0
54
66
0
33
0
0.92
9093--9122
2
15.0
2
92
0
51
53
0
0
46
1.00
9172--9212
2
22.0
2
85
14
52
46
2
0
51
1.14
9101--9287
92
2.0
92
98
0
365
32
14
3
48
1.62
11817--11857
2
21.0
2
95
5
75
51
0
0
48
1.00

Tables:   1

The End!