Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015031.1 Corchorus capsularis cultivar CVL-1 contig15052, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24494

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1167--1191
10
2.5
10
100
0
50
92
0
8
0
0.40
2445--2548
31
3.4
29
76
7
93
30
9
21
38
1.85
2467--2549
31
2.8
29
85
3
103
31
12
20
36
1.89
4289--4334
22
2.1
21
84
4
56
58
15
10
15
1.63
7286--7350
31
2.1
31
97
0
121
21
15
21
41
1.90
22857--23003
75
2.0
74
93
1
249
38
12
9
38
1.76
22881--23006
35
3.5
34
67
25
96
41
14
7
36
1.75
22981--23334
134
2.6
134
80
6
313
35
9
14
39
1.79
23097--23349
134
1.9
134
89
1
391
35
8
14
41
1.76

Tables:   1

The End!