Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015034.1 Corchorus capsularis cultivar CVL-1 contig15055, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77586

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
743--822
30
2.7
29
76
18
76
2
16
25
56
1.53
2735--2782
2
24.0
2
100
0
96
0
0
50
50
1.00
6852--6892
21
1.9
22
85
5
57
34
2
14
48
1.57
7459--7548
42
2.1
42
81
4
101
54
5
34
5
1.47
11096--11206
57
1.9
57
96
0
204
9
15
29
45
1.78
14026--14072
2
23.0
2
91
8
69
46
4
0
48
1.21
14209--14244
11
3.3
11
92
7
56
47
5
2
44
1.41
17874--17917
15
2.9
15
89
3
61
0
40
0
59
0.98
26242--26267
13
2.0
13
100
0
52
53
15
7
23
1.67
26893--26930
1
38.0
1
89
0
58
2
94
0
2
0.35
26893--26932
16
2.7
15
92
7
64
5
92
0
2
0.45
61043--61193
79
1.9
79
95
0
275
45
17
9
27
1.79
69289--69318
5
6.0
5
100
0
60
80
0
0
20
0.72

Tables:   1

The End!