Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015037.1 Corchorus capsularis cultivar CVL-1 contig15058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30811

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1857--2770
332
2.8
331
78
5
867
34
13
13
38
1.85
2977--3805
437
1.9
438
87
2
1209
28
13
16
41
1.86
9485--10351
338
2.6
334
78
5
802
33
14
13
38
1.85
11713--11803
40
2.3
40
90
0
137
28
18
18
34
1.95
12338--12435
49
2.0
49
94
4
171
31
10
29
28
1.90
15100--15136
19
1.9
19
94
0
65
29
18
13
37
1.90
30644--30699
16
3.4
16
73
26
62
12
32
37
17
1.88
30614--30725
34
3.4
34
91
2
165
13
34
37
14
1.85
30733--30810
31
2.5
31
89
4
111
7
35
44
11
1.69

Tables:   1

The End!