Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015038.1 Corchorus capsularis cultivar CVL-1 contig15059, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42480

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5015--5043
14
2.1
14
100
0
58
41
27
17
13
1.87
8327--8574
83
3.0
85
87
4
353
28
20
18
32
1.97
16231--16328
46
2.2
46
96
1
180
12
24
16
46
1.81
22437--22486
24
2.1
24
100
0
100
46
12
26
16
1.81
24610--24716
53
2.0
53
100
0
214
39
16
17
26
1.91
25426--25455
11
2.7
11
100
0
60
6
33
30
30
1.83
27206--27244
19
2.1
19
100
0
78
41
5
10
43
1.61

Tables:   1

The End!