Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015048.1 Corchorus capsularis cultivar CVL-1 contig15069, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25199

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4328--4365
13
3.0
13
80
7
51
81
0
2
15
0.80
8013--8042
12
2.5
12
94
0
51
6
10
16
66
1.41
12245--12528
146
1.9
146
90
0
451
32
17
19
30
1.95
14289--14357
13
5.8
13
75
16
60
55
0
1
43
1.08
14729--14761
3
10.7
3
93
6
57
66
0
0
33
0.92
18408--18438
2
15.5
2
100
0
62
51
0
0
48
1.00
22080--22144
31
2.1
31
100
0
130
20
15
23
41
1.89

Tables:   1

The End!