Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015052.1 Corchorus capsularis cultivar CVL-1 contig15073, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63602

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4287--4323
2
18.5
2
88
0
56
2
0
45
51
1.15
4287--4330
22
2.0
22
90
0
70
6
0
40
52
1.28
24266--24573
154
2.0
154
93
0
526
37
18
12
31
1.89
26440--26871
168
2.6
165
85
5
573
40
15
13
29
1.87
29842--30076
35
6.7
35
88
4
323
32
20
10
36
1.87
36438--36552
45
2.6
45
89
5
166
29
14
9
46
1.77
40434--40520
36
2.4
36
94
3
149
42
8
18
31
1.79
43653--43762
28
4.0
27
83
5
132
20
14
21
43
1.87
43657--43762
55
1.9
55
88
0
158
19
13
22
44
1.85
49967--50340
50
7.6
50
73
11
252
23
26
10
39
1.88
50087--50318
101
2.3
101
88
3
351
21
27
12
38
1.90
59360--59424
28
2.3
28
83
2
76
41
26
1
30
1.65

Tables:   1

The End!