Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015058.1 Corchorus capsularis cultivar CVL-1 contig15079, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21496

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6516--6540
10
2.5
10
100
0
50
48
20
8
24
1.76
12349--12378
15
2.0
15
93
0
51
63
0
6
30
1.20
14875--14907
15
2.2
15
100
0
66
48
6
18
27
1.71
16034--16110
15
4.9
16
76
6
86
40
29
15
14
1.87
16034--16110
31
2.5
31
100
0
154
40
29
15
14
1.87
18610--18688
32
2.5
32
84
10
101
43
7
12
36
1.71

Tables:   1

The End!