Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015060.1 Corchorus capsularis cultivar CVL-1 contig15081, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35147

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5000--5030
2
16.0
2
93
6
55
48
0
0
51
1.00
23936--23997
30
2.1
30
93
0
106
24
40
27
8
1.83
31044--31161
36
3.2
37
91
3
186
27
22
10
39
1.86
31053--31163
37
3.0
37
94
1
188
27
24
9
38
1.87
31170--31288
37
3.2
37
89
1
166
23
24
6
45
1.77
31280--31361
37
2.2
37
82
6
96
26
13
13
46
1.80
31298--31397
35
2.8
36
83
7
105
26
11
14
49
1.76
31370--31929
37
14.9
36
75
14
388
23
19
12
45
1.84
31404--31783
41
9.8
41
74
14
324
22
20
12
45
1.84
31367--31795
76
5.6
76
90
2
655
23
19
12
44
1.84
31956--32559
42
14.3
42
90
1
877
24
21
14
40
1.90
31956--32559
211
2.9
210
90
1
904
24
21
14
40
1.90
31956--32559
253
2.4
253
93
1
1021
24
21
14
40
1.90
32534--32582
24
2.1
23
92
3
80
22
20
10
46
1.80

Tables:   1

The End!