Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015061.1 Corchorus capsularis cultivar CVL-1 contig15082, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16735

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75--116
3
14.0
3
85
14
52
64
0
0
35
0.94
77--131
17
3.2
17
78
19
60
65
0
1
32
1.03
75--131
21
2.8
21
84
12
66
64
0
1
33
1.04
1476--1513
19
2.0
19
89
0
58
23
60
13
2
1.45
1553--1683
16
8.2
16
74
11
117
33
36
19
9
1.85
1553--1667
9
14.5
8
68
23
66
31
36
21
10
1.87
1553--1685
32
4.2
32
85
3
171
33
36
20
9
1.85
1553--1685
47
2.8
46
77
18
130
33
36
20
9
1.85
2209--2290
42
2.0
42
87
0
119
37
17
6
39
1.74
2522--2584
32
2.0
32
87
0
90
30
38
20
11
1.87
2522--2584
16
3.9
16
87
0
81
30
38
20
11
1.87
3273--3331
30
2.0
30
100
0
118
13
3
18
64
1.42
4386--4443
30
1.9
30
93
6
100
20
31
18
29
1.97
4880--4965
33
2.6
33
85
3
102
39
19
9
31
1.84
6402--6437
10
3.5
10
96
3
63
16
0
0
83
0.65

Tables:   1

The End!