Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015062.1 Corchorus capsularis cultivar CVL-1 contig15083, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28253

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
863--893
9
3.6
9
95
4
55
45
6
0
48
1.28
1859--1885
14
1.9
14
100
0
54
66
3
0
29
1.09
13275--13320
21
2.2
21
84
0
56
10
43
30
15
1.81
21422--21475
21
2.6
21
87
0
90
14
20
44
20
1.86
23853--23877
10
2.5
10
100
0
50
48
20
8
24
1.76
24787--24820
12
2.7
13
86
4
52
20
5
8
64
1.43
24817--24843
6
4.5
6
100
0
54
29
0
14
55
1.40
25160--25232
35
2.1
35
82
7
87
35
8
10
45
1.69
25625--25728
50
2.1
50
100
0
208
25
21
19
33
1.97
27973--28032
27
2.3
27
97
2
113
48
11
3
36
1.56

Tables:   1

The End!