Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015065.1 Corchorus capsularis cultivar CVL-1 contig15086, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44689

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3138--3170
13
2.5
13
86
13
50
45
6
0
48
1.27
14657--14765
31
3.6
31
76
9
125
34
18
22
24
1.96
14624--14763
60
2.3
60
93
0
235
32
19
21
27
1.97
14628--14729
29
3.4
29
72
10
98
31
18
21
28
1.97
14830--14931
29
3.4
29
73
15
109
29
19
18
32
1.96
14798--14961
60
2.8
60
95
2
287
26
19
19
34
1.96
17989--18104
58
2.0
58
94
0
205
36
15
18
30
1.92
23439--23486
23
2.1
23
100
0
96
20
25
8
45
1.79
26481--26513
17
1.9
17
100
0
66
27
6
36
30
1.81
36000--36066
22
3.0
22
70
10
55
62
8
7
20
1.49

Tables:   1

The End!