Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015067.1 Corchorus capsularis cultivar CVL-1 contig15088, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38266

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--460
50
9.1
49
83
4
417
17
27
16
37
1.92
1170--1209
21
1.9
21
94
0
71
50
0
2
47
1.14
3857--3906
25
2.0
25
100
0
100
52
4
8
36
1.50
23714--23747
12
2.7
13
86
4
52
64
8
5
20
1.43
23692--23735
23
1.9
23
81
9
54
59
13
4
22
1.53
30077--30110
12
2.7
13
86
4
52
64
8
5
20
1.43
30055--30098
23
1.9
23
81
9
54
59
13
4
22
1.53
31024--31048
10
2.5
10
100
0
50
24
8
20
48
1.76
34204--34250
23
2.0
23
95
0
85
27
34
25
12
1.92
35886--35916
12
2.6
12
89
0
53
22
41
0
35
1.54
36033--36236
87
2.3
87
81
6
252
35
25
7
31
1.85
37187--37233
2
23.5
2
100
0
94
51
0
48
0
1.00

Tables:   1

The End!