Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015071.1 Corchorus capsularis cultivar CVL-1 contig15092, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12108

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1539--1646
33
3.3
33
77
11
96
12
28
36
22
1.91
1625--1666
21
2.0
21
95
0
75
11
33
30
23
1.91
7104--7137
8
4.1
8
85
7
50
23
2
14
58
1.50
8059--8162
33
3.2
32
78
5
100
8
27
41
22
1.83
11959--12003
22
2.0
22
95
0
81
33
2
51
13
1.53

Tables:   1

The End!