Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015076.1 Corchorus capsularis cultivar CVL-1 contig15097, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9138

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2852--3149
135
2.2
135
86
0
409
20
26
24
28
1.99
4089--4128
21
2.0
20
85
5
53
45
17
35
2
1.62
4439--4471
17
1.9
17
100
0
66
27
6
36
30
1.81
5374--5482
33
3.3
33
81
7
114
20
44
26
9
1.81
6461--6485
9
2.8
9
100
0
50
84
8
0
8
0.79
8574--8609
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!