Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015090.1 Corchorus capsularis cultivar CVL-1 contig15111, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36758

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2399--2465
35
1.9
35
84
6
91
14
31
35
17
1.91
5147--5174
2
14.0
2
100
0
56
50
0
0
50
1.00
6610--7627
436
2.3
432
82
4
1202
43
12
13
30
1.81
8545--8582
6
6.3
6
93
0
67
47
34
2
15
1.60
9821--9856
18
1.9
19
88
5
56
80
5
0
13
0.88
31353--31821
66
7.1
66
93
3
775
37
22
14
25
1.92
31353--31821
197
2.4
198
92
3
768
37
22
14
25
1.92

Tables:   1

The End!