Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015092.1 Corchorus capsularis cultivar CVL-1 contig15113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30721

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3760--3820
27
2.3
26
80
11
70
45
6
4
42
1.51
15179--15211
7
4.7
7
85
14
50
72
0
0
27
0.85
24474--24546
26
2.7
27
76
4
85
39
21
16
21
1.92
24939--25083
60
2.5
60
86
2
213
26
24
13
36
1.92
25184--25366
97
1.9
97
85
2
251
26
23
10
39
1.87
25292--25373
36
2.3
36
85
4
103
26
20
9
42
1.83
25392--25435
22
2.0
22
95
0
79
25
22
31
20
1.98
25435--25634
65
3.1
65
91
0
330
20
27
29
22
1.98
27807--27842
17
2.1
17
89
0
54
0
25
2
72
0.98
28077--28120
22
2.0
23
86
4
63
0
18
4
77
0.94
28777--28832
14
4.2
13
81
6
67
37
12
7
42
1.70
28779--28835
27
2.1
28
86
3
80
36
14
7
42
1.72

Tables:   1

The End!