Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015110.1 Corchorus capsularis cultivar CVL-1 contig15131, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26143

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
613--665
21
2.6
21
87
3
72
28
32
32
7
1.85
5540--5660
45
2.7
44
84
7
154
23
23
12
39
1.89
6125--6170
16
2.7
17
78
18
51
43
0
0
56
0.99
8076--8228
51
3.1
51
62
17
124
41
26
3
27
1.73
8062--8252
96
2.0
97
96
1
357
39
27
5
27
1.78
8106--8252
47
3.1
47
61
21
106
35
29
6
27
1.83
8838--8878
21
2.0
21
100
0
82
19
14
34
31
1.92
9408--9629
62
3.6
62
84
1
257
36
13
22
27
1.92
9408--9683
62
4.6
58
79
8
209
35
14
23
27
1.93
9669--10076
49
8.4
47
83
8
394
28
12
33
24
1.93
9669--10077
97
4.2
96
82
5
457
28
12
33
24
1.93
9714--10126
196
2.1
195
83
6
532
29
13
33
24
1.93
9669--10127
49
9.4
48
81
6
374
29
13
33
24
1.93
10769--10820
26
2.0
26
84
3
68
57
11
7
23
1.59
13801--13844
10
4.7
9
80
8
52
47
22
9
20
1.78
14325--14687
156
2.3
156
78
8
373
35
19
15
30
1.92
18269--18322
21
2.6
21
76
2
56
9
38
31
20
1.84
22322--22359
20
2.0
19
85
10
51
18
7
13
60
1.56
23870--23914
13
3.5
13
90
3
74
22
13
8
55
1.65
23911--23943
6
5.5
6
100
0
66
30
0
15
54
1.41

Tables:   1

The End!