Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015116.1 Corchorus capsularis cultivar CVL-1 contig15137, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5112

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1023--1128
27
3.9
27
87
2
149
16
17
25
40
1.90
1258--1301
21
2.1
21
83
8
54
22
9
15
52
1.71
4029--4097
30
2.3
29
80
7
75
53
1
8
36
1.41
4060--4416
49
7.4
49
86
8
410
43
5
13
37
1.68
4058--4456
98
4.1
98
80
9
413
44
5
13
36
1.68
4230--4313
42
2.0
42
88
0
123
41
5
17
34
1.74
4272--4413
50
2.8
50
88
2
196
42
8
16
31
1.78
4181--4371
92
2.1
91
87
2
265
41
6
16
34
1.75

Tables:   1

The End!