Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015118.1 Corchorus capsularis cultivar CVL-1 contig15139, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4085

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
989--1057
30
2.3
29
80
7
75
53
1
8
36
1.41
1018--1423
49
8.3
49
83
7
389
44
5
14
35
1.69
1190--1273
42
2.0
42
85
0
114
42
5
17
33
1.74
1141--1331
92
2.1
92
86
2
258
41
6
17
34
1.76
1232--1373
50
2.8
50
82
4
162
41
9
18
30
1.81
2461--2567
33
3.2
33
81
2
117
8
28
39
24
1.84
3292--3651
55
6.5
55
93
0
558
52
9
16
22
1.71
3917--4070
23
6.9
22
69
15
75
55
4
19
20
1.61
3949--4079
45
2.9
45
76
15
137
56
4
18
20
1.59

Tables:   1

The End!