Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015120.1 Corchorus capsularis cultivar CVL-1 contig15141, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30301

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10033--10081
6
8.5
6
86
8
75
48
14
2
34
1.55
10022--10081
22
2.8
22
84
2
77
48
13
1
36
1.52
12793--12824
2
16.0
2
100
0
64
50
0
0
50
1.00
13712--13801
45
2.0
45
93
0
153
34
18
22
24
1.96
14191--14260
2
36.5
2
73
18
51
51
0
4
44
1.21
14235--14268
17
1.9
17
88
5
50
44
5
0
50
1.26
14349--14373
13
1.9
13
100
0
50
8
32
0
60
1.26
16496--16542
22
2.1
23
88
4
69
57
8
2
31
1.41
16507--16556
22
2.3
22
82
6
57
60
6
2
32
1.32
16520--16558
15
2.6
15
83
0
51
56
5
2
35
1.35
20582--21066
245
2.0
248
83
8
614
41
7
19
31
1.80

Tables:   1

The End!