Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015125.1 Corchorus capsularis cultivar CVL-1 contig15146, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20280

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--40
20
1.9
20
88
0
58
86
2
2
7
0.74
2106--2138
6
5.5
6
100
0
66
54
15
0
30
1.41
2135--2168
12
2.7
13
90
4
52
58
8
11
20
1.59
6231--6269
16
2.3
18
86
8
55
74
2
23
0
0.94
20015--20067
21
2.6
21
85
11
58
47
18
20
13
1.82
20028--20089
21
3.0
21
87
0
88
45
24
19
11
1.83

Tables:   1

The End!