Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015126.1 Corchorus capsularis cultivar CVL-1 contig15147, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19516

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7373--7405
15
2.2
15
89
10
50
15
12
30
42
1.83
8194--8221
14
2.0
14
100
0
56
35
0
14
50
1.43
9013--9103
45
2.0
45
100
0
182
45
8
10
35
1.71
10714--10748
16
2.2
16
94
0
61
40
14
17
28
1.88
11012--11072
16
3.8
16
80
6
70
40
39
13
6
1.70
11059--11098
6
7.2
6
81
16
50
30
52
17
0
1.45
11061--11091
16
2.0
15
93
6
53
25
58
16
0
1.38
11840--11900
17
3.5
18
86
6
90
31
47
19
1
1.59
11840--11900
29
2.1
29
93
0
104
31
47
19
1
1.59
11840--11900
23
2.6
24
92
5
99
31
47
19
1
1.59
11888--11931
15
2.8
16
86
6
63
36
40
18
4
1.71
11840--11900
6
10.5
6
87
7
90
31
47
19
1
1.59
12408--12450
23
1.9
22
85
4
59
23
16
13
46
1.83
12858--12904
25
1.9
25
82
4
60
68
10
8
12
1.40
15709--15787
21
4.1
21
69
20
73
40
6
15
37
1.72
16813--16852
20
2.0
21
85
5
55
55
0
5
40
1.22

Tables:   1

The End!