Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015128.1 Corchorus capsularis cultivar CVL-1 contig15149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23734

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5199--5789
219
2.7
219
82
5
731
31
13
20
33
1.92
12107--12140
17
2.0
17
88
11
52
29
29
11
29
1.92
23280--23363
30
2.8
30
87
1
125
30
10
17
40
1.84
23372--23399
2
14.0
2
100
0
56
50
0
0
50
1.00
23438--23500
27
2.2
28
86
5
83
49
1
4
44
1.33

Tables:   1

The End!