Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001513.1 Corchorus capsularis cultivar CVL-1 contig01513, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5933

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2295--2323
2
14.5
2
100
0
58
51
0
0
48
1.00
3622--3649
2
14.0
2
100
0
56
50
0
0
50
1.00
3647--3676
6
5.0
6
95
0
51
13
16
0
70
1.18
4981--5062
42
1.9
43
85
7
114
23
17
24
35
1.95
5050--5092
20
2.1
21
86
4
61
39
20
18
20
1.93
5906--5933
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!