Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015130.1 Corchorus capsularis cultivar CVL-1 contig15151, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55436

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
353--383
11
2.8
11
90
0
53
32
9
22
35
1.87
4880--4913
15
2.3
15
89
0
50
17
35
0
47
1.48
10246--10276
14
2.3
13
94
5
53
35
19
0
45
1.51
10412--10446
11
3.1
11
91
4
52
85
8
5
0
0.73
16110--16134
6
4.2
6
100
0
50
68
16
16
0
1.22
19885--19928
21
2.0
21
91
4
70
75
2
15
6
1.12
19884--19921
16
2.4
17
91
8
62
78
0
13
7
0.94
27453--27718
79
3.5
77
85
7
303
27
15
9
47
1.76
38359--38442
33
2.5
34
94
3
143
66
10
11
10
1.45
41686--41711
1
26.0
1
100
0
52
0
0
0
100
0.00
42541--42581
20
2.0
20
90
9
66
24
4
39
31
1.76
52102--52138
16
2.4
15
91
8
65
35
0
0
64
0.94

Tables:   1

The End!