Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015134.1 Corchorus capsularis cultivar CVL-1 contig15155, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56536

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--117
25
4.7
25
86
0
162
28
25
23
22
1.99
1--117
50
2.3
50
92
2
191
28
25
23
22
1.99
1245--1285
3
13.7
3
100
0
82
68
0
0
31
0.90
21078--21122
11
4.2
11
88
2
65
0
13
20
66
1.24
26540--26892
178
2.0
178
87
2
512
32
15
19
32
1.93
49168--49263
50
1.9
50
100
0
192
40
16
19
22
1.91

Tables:   1

The End!