Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015137.1 Corchorus capsularis cultivar CVL-1 contig15158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14873

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4474--4671
31
6.5
31
76
1
175
20
21
24
33
1.97
4490--4659
62
2.8
61
81
1
205
21
20
22
36
1.95
6109--6152
21
2.1
21
95
0
79
22
27
11
38
1.88
6189--6253
33
2.0
33
84
6
87
13
38
32
15
1.87
7170--7207
20
1.9
20
89
10
60
13
7
0
78
0.94
7171--7209
14
2.8
13
81
11
51
15
5
0
79
0.90
8163--8218
28
2.0
28
85
0
76
39
28
10
21
1.87
14841--14873
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!