Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015142.1 Corchorus capsularis cultivar CVL-1 contig15163, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42859

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11651--12184
229
2.4
223
87
4
743
32
18
19
30
1.96
12999--13024
12
2.2
12
100
0
52
53
0
7
38
1.30
17524--17598
29
2.6
28
87
4
105
21
25
16
37
1.93
17732--17809
29
2.7
30
80
6
97
34
14
32
19
1.91
25040--25394
180
2.0
180
93
0
602
29
18
22
28
1.98
36964--37218
130
2.0
127
93
3
433
32
18
17
30
1.94
41995--42031
19
1.9
19
88
0
56
37
16
13
32
1.87

Tables:   1

The End!