Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015147.1 Corchorus capsularis cultivar CVL-1 contig15168, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87301

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--8695
323
27.2
322
82
5
9415
34
16
14
34
1.89
15328--15395
2
34.5
2
97
2
129
0
51
0
48
1.00
15763--15965
104
2.0
103
93
1
343
35
15
15
32
1.90
45837--45962
16
7.7
16
79
7
119
23
16
31
28
1.96
45838--45970
17
8.1
17
81
4
139
23
15
30
30
1.95
72603--72721
60
2.0
60
90
3
186
30
14
15
39
1.87
72608--72742
60
2.2
59
85
5
180
32
13
11
42
1.80
72608--72766
60
2.7
60
81
5
171
32
13
12
40
1.83
73429--73473
22
2.0
22
91
0
72
51
20
2
26
1.59
74379--74456
29
2.7
28
77
15
86
39
29
14
16
1.88
74891--74980
29
3.0
28
75
16
83
18
13
28
38
1.89
80447--80490
1
44.0
1
81
0
52
0
0
9
90
0.44
80517--80548
3
10.7
3
100
0
64
31
0
0
68
0.90

Tables:   1

The End!