Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015148.1 Corchorus capsularis cultivar CVL-1 contig15169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65815

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5375--5412
15
2.5
15
95
0
67
0
26
42
31
1.56
6065--6118
27
2.0
27
96
0
99
46
7
33
12
1.70
15652--15685
2
17.0
2
93
0
59
47
0
0
52
1.00
16853--16905
9
5.9
9
84
8
63
3
30
41
24
1.72
16853--16905
27
2.0
27
85
7
72
3
30
41
24
1.72
16851--16922
9
8.0
9
74
0
54
4
26
43
26
1.73
17499--17630
69
1.9
69
96
0
246
26
25
25
23
2.00
19787--19818
17
1.9
16
93
6
55
28
28
12
31
1.93
34131--34174
3
14.7
3
87
0
61
0
29
2
68
1.02
34134--34183
15
3.3
15
85
0
64
2
28
2
68
1.12
34813--34841
2
14.5
2
100
0
58
0
48
0
51
1.00
41695--41723
8
3.6
8
100
0
58
0
10
0
89
0.48
42642--42679
19
2.0
19
94
0
67
63
2
21
13
1.42
63092--63121
8
3.8
8
95
0
51
46
13
0
40
1.43

Tables:   1

The End!