Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015149.1 Corchorus capsularis cultivar CVL-1 contig15170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56065

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
119--149
14
2.1
15
94
5
55
45
16
12
25
1.83
433--541
31
3.9
30
70
22
101
38
26
18
16
1.92
484--585
31
3.3
31
80
1
107
31
26
21
20
1.98
7516--7799
144
2.0
144
97
0
532
31
22
20
25
1.98
13266--13297
4
8.0
4
92
0
55
50
21
0
28
1.49
15336--15366
15
2.1
14
94
5
53
0
9
0
90
0.46
18446--18479
2
17.0
2
100
0
68
50
0
0
50
1.00
34378--34422
21
2.1
22
91
4
74
44
8
17
28
1.79
34683--34710
8
3.5
8
100
0
56
25
0
39
35
1.56
37554--37608
27
2.0
27
92
0
92
40
23
27
9
1.85
45903--45953
24
2.1
24
88
0
75
49
5
9
35
1.60
52806--53121
32
10.0
32
95
2
577
30
9
25
35
1.87
52806--53121
63
5.0
63
96
1
580
30
9
25
35
1.87
52806--53121
95
3.3
95
97
0
598
30
9
25
35
1.87
54898--55958
332
3.2
330
81
5
1252
30
13
18
37
1.90

Tables:   1

The End!