Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015154.1 Corchorus capsularis cultivar CVL-1 contig15175, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26641

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10271--10300
15
2.0
15
93
0
51
43
0
0
56
0.99
12353--12379
2
13.5
2
100
0
54
51
0
0
48
1.00
12669--12703
18
1.9
18
88
0
52
34
11
11
42
1.77
13056--13129
29
2.5
29
82
2
94
18
21
17
41
1.90
16215--16248
11
3.4
10
88
11
52
82
0
0
17
0.67
16219--16249
11
2.9
11
95
4
55
83
0
0
16
0.64
21630--21697
34
2.0
34
100
0
136
29
17
8
44
1.79

Tables:   1

The End!