Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015159.1 Corchorus capsularis cultivar CVL-1 contig15180, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70174

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16553--16597
21
2.1
21
100
0
90
44
13
17
24
1.85
32675--32704
13
2.3
13
94
0
51
3
20
0
76
0.92
37857--37922
33
2.1
30
83
13
80
6
13
18
62
1.51
41223--41262
20
2.0
20
95
4
73
37
0
37
25
1.56
44404--44462
28
2.1
28
84
6
75
38
3
10
47
1.54
48677--48701
11
2.3
11
100
0
50
56
8
0
36
1.29
55113--55231
65
1.9
63
89
5
186
44
11
22
21
1.84
62561--62593
2
16.5
2
100
0
66
51
0
0
48
1.00
63025--63082
30
1.9
31
89
3
91
34
12
3
50
1.57

Tables:   1

The End!