Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015160.1 Corchorus capsularis cultivar CVL-1 contig15181, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60112

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9665--9705
14
2.9
14
85
0
64
31
12
9
46
1.74
13889--13919
2
15.5
2
100
0
62
0
0
48
51
1.00
17967--17994
2
14.0
2
100
0
56
50
0
0
50
1.00
19199--19297
51
1.9
51
95
0
180
27
10
26
36
1.88
23203--23228
11
2.4
11
100
0
52
46
0
7
46
1.31
26771--26800
2
15.0
2
100
0
60
50
0
0
50
1.00
27081--27172
29
3.2
29
84
3
114
33
25
26
15
1.95
28746--29411
338
2.0
335
86
5
932
33
16
16
33
1.92
32018--32085
34
2.0
34
100
0
136
50
14
8
26
1.72
52460--52489
14
2.2
14
94
5
53
3
6
33
56
1.42
53589--53618
5
5.8
5
96
4
51
20
3
0
76
0.92
55731--60106
327
13.5
321
83
5
5182
35
16
14
33
1.90
55731--60106
651
6.7
645
85
5
5383
35
16
14
33
1.90

Tables:   1

The End!