Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015167.1 Corchorus capsularis cultivar CVL-1 contig15188, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50266

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5530--5566
2
18.5
2
100
0
74
48
0
0
51
1.00
13747--13800
18
3.0
18
94
0
90
42
16
24
16
1.88
14773--14923
71
2.1
71
96
0
275
32
13
9
43
1.78
14927--14990
32
2.0
32
100
0
128
31
12
18
37
1.88
26356--26380
12
2.1
12
100
0
50
36
32
8
24
1.84
38808--38836
4
7.2
4
100
0
58
0
24
0
75
0.80
45876--45903
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!