Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01015171.1 Corchorus capsularis cultivar CVL-1 contig15192, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52127

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9573--9602
6
5.0
6
100
0
60
50
0
33
16
1.46
10559--10593
5
7.0
5
100
0
70
60
20
20
0
1.37
15746--15784
14
2.7
15
84
8
53
33
5
5
56
1.43
26444--26478
18
2.0
17
94
5
61
34
11
11
42
1.77
26655--26687
2
16.0
2
93
6
57
48
0
3
48
1.17
35661--35697
2
18.5
2
100
0
74
48
0
0
51
1.00
45505--45564
33
1.9
32
83
10
79
30
48
11
10
1.72
46636--46718
44
1.9
42
85
4
112
45
12
24
18
1.82

Tables:   1

The End!